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ToxPredict Tutorial exercises
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ToxPredict Tutorial exercises step by step slides (PDF)
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ToxPredict tutorial exercises
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ToxPredict tutorial Exercises step by step slides (PPTX)
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ToxPredict Exercise 3 file
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File to upload during Exercise 3
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Update opentox.owl to API 1.2
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Update opentox.owl to API 1.2 , make it available via
http://opentox.org/api/1.2/opentox.owl and in Collaborative Protege
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R support by Opentox services
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R support by Opentox services
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Dataset browser GUI
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GUI for datasets uploading, browsing, annotating, searching, allowing to view OpenSSO protected data.
Independent of services implementation
To be used ...
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AA support for IDEA services
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1)Generic package to support OpenTox AA
Code available at https://ambit.svn.sourceforge.net/svnroot/ambit/trunk/opentox-opensso
2)Integrate with IDEA ...
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ToXML support by dataset services
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1)ToXML parser , allowing to import ToXML files via /dataset POST
Code available ...
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Performance improvements of IDEA services
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Rewrite tasks handling code to reject tasks if the system is overloaded.
Run benchmarks to compare different configurations of thread executor pools and task ...
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Read across application
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Read across application
User interface design
User interface implementation
Supporting functionalities
- Prepare SMARTS for OECD Categories (under ...
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opentox-rest.owl
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Ontology for OpenTox REST API
opentox-rest.owl
To become formal description of OpenTox API, as described at wiki pages ...
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Enhanced metadata for algorithms, models and datasets
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Ensure standardized metadata for algorithms, models and datasets is used across all OpenTox services.
Extend OT API / make use of external ontologies when ...
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opentox-rest.owl
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Ontology for OpenTox REST API
opentox-rest.owl
To become formal description of OpenTox API, as described at wiki pages ...
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OpenTox overview slides, presented in a CADASTER meeting
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OpenTox overview slides, presented in a CADASTER meeting
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Readings
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Readings
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Suggestions for the next API
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Suggestions for the next API
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consider RDF/ JSON serialisation
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consider RDF/ JSON serialisation
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consider RDF/ JSON serialisation
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consider RDF/ JSON serialisation
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Report(s) for a model
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Report(s) for a model
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GET /report/{report-type}/{id}
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GET /report/{report-type}/{id}
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Suggestions for the next API
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Suggestions for the next API
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IST Compound
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IST Compound service
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IdeaConsult Dataset
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Dataset service
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IdeaConsult Task service
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Asynchronous tasks status
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Task
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An entry point to inspect asynchronous tasks of an OpenTox service
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Similarity search
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Find similar compounds
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IdeaConsult Models
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Models service
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Substructure search
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Find compounds, containing SMARTS specified substructure
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IdeaConsult services
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IdeaConsult services
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IdeaConsult Compound service
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Compound