figures
screenshots and other figures used in the tutorial
- Running a model on a dataset in AMBIT
- Screenshot for launching a predictive model on a chosen dataset URL from within the AMBIT data service
- Results of applying a model
- The results of the predictive model are delivered as a URL
- Distribution of Cramer classes in TCAMS
- Depiction of the distribution of the Cramer classes in the TCAMS dataset, depicted using the OpenTox chart generation service.
- Browsing the results
- Browsing the results of a search in AMBIT.
- Retrieving the feature URL
- How to retrieve the URL of a feature in AMBIT
- Adding a column
- Adding a column to the compounds with the feature_uris[] directive.
- Adding another feature
- Another column is added to the compounds with the feature_uris[] derictive.
- Selecting Benigni/Bossa rulebase
- Selecting the Benigni/Bossa rulebase for mutagenicity and carcinogenicity.
- Search results enhanced with predictions
- Search results enhanced with columns for carcinogenicity predictions.
- Running SmartCYP
- Running SmartCYP on the TCAMS Malaria Box.
- Example SmartCYP output
- Example SmartCYP output
- SmartCYP colour code
- SmartCYP output colour code
- Example SOME output
- Example SOME output
- SOME colour code
- Colour code of the SOME output.
- List of antimalarial datasets
- The list of antimalarial datasets on http://pirin.uni plovdiv.bg:8080/malaria/dataset
- Ser/Thr protein kinases in TCAMS
- Search results for "Ser/Thr protein kinase" on the TCAMS antimalarial dataset in AMBIT.
- SuperService
- TaskStatus
- PieChartCramerRules
- FilteredResults
- FeatureURI
- SelectedColumns
- BenigniBossaFeatureURIs
- FilteredResultsBenigniBossa
- SmartCypModelPage
- SmartCypTaskRunning
- SmartCypTaskCompleted
- SmartCypHighlights
- SmartCypLegendLink
- DownloadCSV
- ExcelTableKinaseInhibitorData