Example (RDF/XML)
An OWL file, based on OpenTox objects ontology and consisting of example instances for all objects. Can be used as example RDF representation of objects.
opentox-example.owl
—
Extensible Markup Language (XML),
25Kb
File contents
<?xml version="1.0"?>
<rdf:RDF
xmlns:p1="http://www.w3.org/1998/Math/MathML"
xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#"
xmlns:xsp="http://www.owl-ontologies.com/2005/08/07/xsp.owl#"
xmlns:ot="http://www.opentox.org/api/1.1#"
xmlns:otee="http://www.opentox.org/echaEndpoints.owl#"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns="http://www.opentox.org/example/1.1#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:p2="http://www.opentox.org/algorithmTypes.owl#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xml:base="http://www.opentox.org/example/1.1">
<owl:Ontology rdf:about="">
<owl:imports rdf:resource="http://www.blueobelisk.org/ontologies/chemoinformatics-algorithms/"/>
<owl:imports rdf:resource="http://www.opentox.org/api/1.1"/>
<owl:imports rdf:resource="http://www.opentox.org/algorithmTypes.owl"/>
<owl:imports rdf:resource="http://www.opentox.org/echaEndpoints.owl"/>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An example of OpenTox resource ontology usage. Definition of examle instances</rdfs:comment>
</owl:Ontology>
<owl:Class rdf:ID="FeatureCarcinogenicity">
<rdfs:subClassOf rdf:resource="http://www.opentox.org/api/1.1#Feature"/>
<rdfs:subClassOf rdf:resource="http://www.opentox.org/echaEndpoints.owl#Carcinogenicity"/>
</owl:Class>
<owl:Class rdf:ID="AlgorithmWekaJ48Class">
<rdfs:subClassOf rdf:resource="http://www.opentox.org/api/1.1#Algorithm"/>
</owl:Class>
<ot:YScrambling rdf:ID="YScrambling_2">
<ot:yScramblingSeed rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>1</ot:yScramblingSeed>
<ot:unscrambledDatasetURI>
<ot:Dataset rdf:ID="DSSToxCPDBAS">
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/dataset/{datasetid}</dc:identifier>
<dc:source rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://www.epa.gov/ncct/dsstox</dc:source>
<ot:dataEntry>
<ot:DataEntry>
<ot:values>
<ot:FeatureValue>
<ot:feature>
<ot:Feature rdf:ID="MultiCellCall">
<dc:source rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://www.epa.gov/NCCT/dsstox/CentralFieldDef.html#ActivityOutcome_CPDBAS_MultiCellCall</dc:source>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>MultiCellCall</dc:title>
<ot:hasSource rdf:resource="#DSSToxCPDBAS"/>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myserice/feature/{featureid1}</dc:identifier>
</ot:Feature>
</ot:feature>
<ot:value rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</ot:value>
</ot:FeatureValue>
</ot:values>
<ot:values>
<ot:FeatureValue>
<ot:feature>
<ot:Feature rdf:ID="XLogPDescriptor">
<ot:hasSource>
<ot:Algorithm rdf:ID="XLogPCalculation">
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/algorithm/{algorithmid}</dc:identifier>
<owl:sameAs rdf:resource="http://www.blueobelisk.org/ontologies/chemoinformatics-algorithms/#xlogP"/>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>XLogP</dc:title>
</ot:Algorithm>
</ot:hasSource>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>XLogP</dc:title>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/feature/{featureid2}</dc:identifier>
</ot:Feature>
</ot:feature>
<ot:value rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>2.02</ot:value>
</ot:FeatureValue>
</ot:values>
<ot:compound>
<ot:Compound rdf:ID="benzene">
<ot:conformer>
<ot:Conformer rdf:ID="Conformer_1">
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>/conformer/{id}</dc:identifier>
</ot:Conformer>
</ot:conformer>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/compound/{compoundid1}</dc:identifier>
</ot:Compound>
</ot:compound>
</ot:DataEntry>
</ot:dataEntry>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>CPDBAS</dc:title>
</ot:Dataset>
</ot:unscrambledDatasetURI>
<ot:yScramblingEnabled rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</ot:yScramblingEnabled>
</ot:YScrambling>
<ot:Task rdf:ID="TaskCompleted">
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>URI to WekaJ48 Algorithm</dc:creator>
<ot:hasStatus rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Completed</ot:hasStatus>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>/task/id</dc:identifier>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>start date/timestamp</dc:date>
<ot:percentageCompleted rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>100.0</ot:percentageCompleted>
</ot:Task>
<ot:Task rdf:ID="TaskCancelled">
<ot:hasStatus rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Cancelled</ot:hasStatus>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>start date/timestamp</dc:date>
<ot:percentageCompleted rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>66.0</ot:percentageCompleted>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>/task/id</dc:identifier>
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>URI to algorithm</dc:creator>
</ot:Task>
<ot:Task rdf:ID="TaskRunning">
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>URI to algorithm</dc:creator>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>/task/id</dc:identifier>
<ot:hasStatus rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Running</ot:hasStatus>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>start date/timestamp</dc:date>
<ot:percentageCompleted rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>31.4</ot:percentageCompleted>
</ot:Task>
<ot:Parameter rdf:ID="Parameter_1">
<ot:paramScope rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>mandatory</ot:paramScope>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>-M 10</ot:paramValue>
</ot:Parameter>
<ot:Algorithm rdf:ID="AlgorithmMLR"/>
<AlgorithmWekaJ48Class rdf:ID="AlgorithmWekaJ48Instance">
<ot:statisticsSupported rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>whatever</ot:statisticsSupported>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>/algorithm/id</dc:identifier>
<ot:parameters>
<ot:Parameter rdf:ID="Parameter_4">
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A</ot:paramValue>
</ot:Parameter>
</ot:parameters>
<ot:parameters>
<ot:Parameter rdf:ID="Parameter_5">
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>B</ot:paramValue>
</ot:Parameter>
</ot:parameters>
</AlgorithmWekaJ48Class>
<ot:DataEntry>
<ot:compound>
<ot:Compound rdf:ID="phenol">
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/compound/{compoundid2}</dc:identifier>
</ot:Compound>
</ot:compound>
<ot:values>
<ot:FeatureValue>
<ot:feature>
<FeatureCarcinogenicity rdf:ID="CarcinogenicityToxtree">
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>/feature/2</dc:identifier>
<ot:hasSource>
<ot:Model rdf:ID="ToxtreeCarcinogenicity">
<ot:predictedVariables rdf:resource="#CarcinogenicityToxtree"/>
<ot:algorithm>
<ot:Algorithm rdf:ID="Toxtree"/>
</ot:algorithm>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>/model/toxtreeBB</dc:identifier>
</ot:Model>
</ot:hasSource>
</FeatureCarcinogenicity>
</ot:feature>
<ot:value rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>yes</ot:value>
</ot:FeatureValue>
</ot:values>
</ot:DataEntry>
<ot:Algorithm rdf:ID="AlgorithmSVM">
<dc:format rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>text/xml</dc:format>
<dc:description rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Training Algorithm for Support VectorMachine Regression Models</dc:description>
<ot:statisticsSupported rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>RootRelativeSquaredError</ot:statisticsSupported>
<ot:parameters>
<ot:Parameter rdf:ID="SVMParam4">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>gamma</dc:title>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#double"
>1</ot:paramValue>
</ot:Parameter>
</ot:parameters>
<ot:parameters>
<ot:Parameter rdf:ID="SVMParam5">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>coeff0</dc:title>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#double"
>0</ot:paramValue>
</ot:Parameter>
</ot:parameters>
<owl:sameAs rdf:resource="http://www.opentox.org/algorithms.owl#RegressionEagerSingleTarget"/>
<ot:parameters>
<ot:Parameter rdf:ID="SVMParam8">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>cacheSize</dc:title>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>10</ot:paramValue>
</ot:Parameter>
</ot:parameters>
<ot:statisticsSupported rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>RelativeAbsoluteError</ot:statisticsSupported>
<dc:contributor rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://opentox.org/</dc:contributor>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://opentox.ntua.gr:3000/algorithm/svm</dc:identifier>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Support Vector Machine Regression</dc:title>
<ot:parameters>
<ot:Parameter rdf:ID="SVMParam1">
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>rbf</ot:paramValue>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>linear</ot:paramValue>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>sigmoid</ot:paramValue>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>polynomial</ot:paramValue>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>kernel</dc:title>
</ot:Parameter>
</ot:parameters>
<ot:parameters>
<ot:Parameter rdf:ID="SVMParam6">
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#integer"
>3</ot:paramValue>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Degree</dc:title>
</ot:Parameter>
</ot:parameters>
<dc:rights rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://www.gnu.org/licenses/gpl.txt</dc:rights>
<ot:statisticsSupported rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>RootMeanSquaredError</ot:statisticsSupported>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>2009-11-18</dc:date>
<dc:relation rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://opentox.org</dc:relation>
<ot:parameters>
<ot:Parameter rdf:ID="SVMParam2">
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#double"
>10</ot:paramValue>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>cost</dc:title>
</ot:Parameter>
</ot:parameters>
<ot:parameters>
<ot:Parameter rdf:ID="SVMParam3">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>epsilon</dc:title>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#double"
>0.1</ot:paramValue>
</ot:Parameter>
</ot:parameters>
<dc:publisher rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://opentox.ntua.gr:3000</dc:publisher>
<ot:statisticsSupported rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>MeanAbsoluteError</ot:statisticsSupported>
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://opentox.ntua.gr:3000</dc:creator>
<ot:parameters>
<ot:Parameter rdf:ID="SVMParam7">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>tolerance</dc:title>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#double"
>1e-4</ot:paramValue>
</ot:Parameter>
</ot:parameters>
<dc:source rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://opentox.ntua.gr:3000</dc:source>
</ot:Algorithm>
<ot:Report rdf:ID="DemoReport">
<dc:description rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Human readable description</dc:description>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Creation date</dc:date>
<ot:validationReport>
<ot:Validation rdf:ID="Validation_19">
<ot:elapsedTimeTesting rdf:datatype="http://www.w3.org/2001/XMLSchema#long"
>1000</ot:elapsedTimeTesting>
<ot:validationPredictionDataset>
<ot:Dataset rdf:ID="DatasetPredicted">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Multi Cell Call prediction from J48</dc:title>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/dataset/{datasetid}</dc:identifier>
<ot:dataEntry>
<ot:DataEntry>
<ot:values>
<ot:FeatureValue>
<ot:feature>
<ot:Feature rdf:ID="MultiCellCallPredicted">
<ot:hasSource>
<ot:Algorithm rdf:ID="WekaJ48">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>J48</dc:title>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/algorithm/{algorithmid}</dc:identifier>
<dc:source rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>www.cs.waikato.ac.nz/ml/weka/</dc:source>
<rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
></rdfs:comment>
<owl:sameAs rdf:resource="http://www.opentox.org/algorithms.owl#ClassificationEagerSingleTarget"/>
<ot:parameters>
<ot:Parameter rdf:nodeID="A0">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Pruning</dc:title>
<ot:paramScope rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>mandatory</ot:paramScope>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>-P</ot:paramValue>
</ot:Parameter>
</ot:parameters>
<ot:parameters>
<ot:Parameter rdf:nodeID="A1">
<ot:paramScope rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>optional</ot:paramScope>
<ot:paramValue rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>-M 10</ot:paramValue>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Max number of instances in a node</dc:title>
</ot:Parameter>
</ot:parameters>
</ot:Algorithm>
</ot:hasSource>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>MultiCellCall</dc:title>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/feature/{featureid3}</dc:identifier>
</ot:Feature>
</ot:feature>
<ot:value rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</ot:value>
</ot:FeatureValue>
</ot:values>
<ot:compound rdf:resource="#benzene"/>
</ot:DataEntry>
</ot:dataEntry>
</ot:Dataset>
</ot:validationPredictionDataset>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/validation/{validationid}</dc:identifier>
<ot:validationModel>
<ot:Model rdf:ID="DemoModel">
<ot:predictedVariables rdf:resource="#MultiCellCallPredicted"/>
<ot:trainingDataset rdf:resource="#DSSToxCPDBAS"/>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The date of model creation</dc:date>
<ot:parameters rdf:nodeID="A0"/>
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The model creator (perhaps a link to User resource)</dc:creator>
<ot:dependentVariables rdf:resource="#MultiCellCall"/>
<ot:parameters rdf:nodeID="A1"/>
<ot:algorithm rdf:resource="#WekaJ48"/>
<ot:independentVariables rdf:resource="#XLogPDescriptor"/>
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Model name</dc:title>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/model/modelid</dc:identifier>
<dc:format rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The native format of the model content (e.g. PMML, Weka model, etc.)</dc:format>
</ot:Model>
</ot:validationModel>
<ot:hasValidationInfo>
<ot:CrossValidationInfo>
<ot:fold rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>2</ot:fold>
</ot:CrossValidationInfo>
</ot:hasValidationInfo>
<ot:CPUTimeTesting rdf:datatype="http://www.w3.org/2001/XMLSchema#long"
>1000</ot:CPUTimeTesting>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Creation date</dc:date>
<ot:hasValidationInfo>
<ot:ClassificationInfo rdf:ID="v1">
<ot:precision rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>1.0</ot:precision>
<ot:truePositiveRate rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>1.0</ot:truePositiveRate>
<ot:percentUnclassified rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.0</ot:percentUnclassified>
<ot:numberIncorrect rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>0</ot:numberIncorrect>
<ot:fMeasure rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>1.0</ot:fMeasure>
<ot:falseNegativeRate rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.0</ot:falseNegativeRate>
<ot:numberCorrect rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>1</ot:numberCorrect>
<ot:numberUnclassified rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>0</ot:numberUnclassified>
<ot:areaUnderROC rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.75</ot:areaUnderROC>
<ot:numTrue_negatives rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.0</ot:numTrue_negatives>
<ot:numFalseNegatives rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>0</ot:numFalseNegatives>
<ot:numTruePositives rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>1</ot:numTruePositives>
<ot:trueNegativeRate rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.0</ot:trueNegativeRate>
<ot:numFalsePositives rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>0</ot:numFalsePositives>
<ot:percentCorrect rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>100.0</ot:percentCorrect>
<ot:percentIncorrect rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.0</ot:percentIncorrect>
<ot:falsePositiveRate rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.0</ot:falsePositiveRate>
<ot:kappaStatistic rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>1.0</ot:kappaStatistic>
<ot:recall rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>1.0</ot:recall>
</ot:ClassificationInfo>
</ot:hasValidationInfo>
<ot:validationTestDataset>
<ot:Dataset rdf:ID="DatasetTest">
<dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Test dataset for Model M1</dc:title>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/dataset/{datasetid}</dc:identifier>
<ot:dataEntry>
<ot:DataEntry>
<ot:values>
<ot:FeatureValue>
<ot:value rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>false</ot:value>
<ot:feature rdf:resource="#MultiCellCall"/>
</ot:FeatureValue>
</ot:values>
<ot:values>
<ot:FeatureValue>
<ot:feature rdf:resource="#MultiCellCallPredicted"/>
<ot:value rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>false</ot:value>
</ot:FeatureValue>
</ot:values>
<ot:compound rdf:resource="#phenol"/>
</ot:DataEntry>
</ot:dataEntry>
</ot:Dataset>
</ot:validationTestDataset>
</ot:Validation>
</ot:validationReport>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://myservice/report/{reportid}</dc:identifier>
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Report author</dc:creator>
</ot:Report>
<ot:RegressionInfo rdf:ID="RegressionInfo_1">
<ot:relativeAbsoluteError rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.2</ot:relativeAbsoluteError>
<ot:rootMeanSquaredError rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.2</ot:rootMeanSquaredError>
<ot:meanAbsolutError rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.1</ot:meanAbsolutError>
<ot:rootRelativeSquaredError rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.4</ot:rootRelativeSquaredError>
</ot:RegressionInfo>
<ot:DataEntry>
<ot:compound rdf:resource="#phenol"/>
<ot:values>
<ot:FeatureValue>
<ot:feature>
<FeatureCarcinogenicity rdf:ID="CarcinogenicityLazar">
<ot:hasSource>
<ot:Model rdf:ID="Lazar">
<ot:predictedVariables rdf:resource="#CarcinogenicityLazar"/>
<ot:algorithm>
<ot:Algorithm rdf:ID="LazarAlgorithm">
<owl:sameAs rdf:resource="http://www.opentox.org/algorithms.owl#ClassificationLazySingleTarget"/>
</ot:Algorithm>
</ot:algorithm>
</ot:Model>
</ot:hasSource>
<dc:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>/feature/1</dc:identifier>
</FeatureCarcinogenicity>
</ot:feature>
<ot:value rdf:datatype="http://www.w3.org/2001/XMLSchema#float"
>0.66</ot:value>
</ot:FeatureValue>
</ot:values>
</ot:DataEntry>
<ot:Dataset rdf:ID="DatasetPredictedLazar"/>
</rdf:RDF>
<!-- Created with Protege (with OWL Plugin 3.4.1, Build 536) http://protege.stanford.edu -->
